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General neuroinformatics
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General neuroinformatics (24)
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Reducing duplication and redundancy in declarative model specifications
Robert Cannon (Textensor Limited), Padraig Gleeson (University College London), Sharon Crook (Arizona State University), Angus Silver (University College London)
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High-speed simulation of the dynamic neural responses of retinal and cortical simple neurons to complex visual scenes using general purpose computing on graphics processing units.
Osamu Shouno (Honda Research Institute Japan Co., Ltd.), Hiroshi Tsujino (Honda Research Institute Japan Co., Ltd.)
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Exploring Mammalian Brain Connectivity using NeuroLex
Anita Bandrowski (University of California San Diego), Amarnath Gupta (University of California San Diego), Auroni Gupta (University of California San Diego), Stephen Larson (University of California San Diego), Maryann Martone (University of California San Diego)
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SenseLab: Neuroinformatics tools to support multiscale and multidisciplinary integration.
Gordon Shepherd (Yale)
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3D structure and cellular architecture of the thalamo cortical vibrissal system
Robert Egger (Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL), Hanno S. Meyer (Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL), Stefan Reissl (Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL), Rajeevan T. Narayanan (Integrative Neurophysiology, Ctr. for Neurogenomics and Cognitive Res. (CNCR), Amsterdam), Christiaan P.J. de Kock (Integrative Neurophysiology, Ctr. for Neurogenomics and Cognitive Res. (CNCR), Amsterdam), Rita Foerster (Max Planck Institute of Neurobiology, Munich), Bert Sakmann (Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL), Marcel Oberlaender (Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL)
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Simulator for Realistic High-Density Microelectrode Array Signals
David Jäckel (ETH Zurich, Department of Biosystems Science and Engineering), Urs Frey (RIKEN, Quantitative Biology Center), Felix Franke (ETH Zurich, Department of Biosystems Science and Engineering), Andreas Hierlemann (ETH Zurich, Department of Biosystems Science and Engineering)
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Functional Contributions Derived from the Game-theoretical Analysis of Brain Damage after Stroke
Melissa Zavaglia (Dept. Comput. Neurosci. Univ. Med. Ctr. Hamburg-Eppendorf; Jacobs Univ. Bremen), Nils D Forkert (Dept. Comput. Neurosci. Univ. Med. Ctr. Hamburg-Eppendorf), Bastian Cheng (Dept. Neurology, Univ. Med. Ctr. Hamburg-Eppendorf), Götz Thomalla (Dept. Neurology, Univ. Med. Ctr. Hamburg-Eppendorf), Claus C Hilgetag (Dept. Comput. Neurosci. Univ. Med. Ctr. Hamburg-Eppendorf; Jacobs Univ. Bremen; Boston Univ.)
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TissueStack: a new way to view your imaging data
Andrew Janke (Center for Advanced Imaging), Harald Waxenegger (Center for Advanced Imaging), Jeremy Ullmann (Center for Advanced Imaging), Graham Galloway (Center for Advanced Imaging)
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PCA-VisData - a new Evaluation and Visualization Tool Using the Database RodImAnD for Analysis of Rodents Brain Function in Drug Research
Laura Cristina Konerth (Instit. of Pharmacology, FAU Erlangen-Nuremberg), Andreas Hess (Instit. of Pharmacology, FAU Erlangen-Nuremberg, INCF: Digital Atlasing Infrastructure Task Force)
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Connecting Brain Imaging Terms to Established Lexicons: a Precursor for Data Sharing and Querying
Karl Helmer (Massachusetts General Hospital), Satrajit Ghosh (Massachusetts Institute of Technology), B. Nolan Nichols (University of Washington), David Keator (University of California, Irvine), Thomas Nichols (University of Warwick), Jessica Turner (The Mind Institute)
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COINS (Collaborative Informatics Neuroimaging Suite): Give, Get, Collect
Margaret King (The Mind Research Network), William Courtney (The Mind Research Network), Jessica Turner (The Mind Research Network), Runtang Wang (The Mind Research Network), Dylan Wood (The Mind Research Network), Vince Calhoun (The Mind Research Network)
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SignalML 2.0
Zbigniew Jędrzejewski-Szmek (Faculty of Physics, University of Warsaw), Aleksander Michalski (Nencki Intitute of Experimental Biology), Kamil Góźdź (Ericpol), Jakub Hałun (Ericpol), Grzegorz Stadnik (Ericpol), Joanna Jędrzejewska-Szmek (Faculty of Physics, University of Warsaw), Paweł Kordowski (Faculty of Physics, University of Warsaw), Piotr Durka (Faculty of Physics, University of Warsaw)
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Orchestration of web services in the NIF project: using the Kepler workflow engine for data fusion
Vadim Astakhov (UCSD), Anita Bandrowski (UCSD), Amarnath Gupta (UCSD), Jeffery Grethe (UCSD), Maryann Martone (UCSD)
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Representation of the NeuroNames Ontology in OWL
Douglas Bowden (University of Washington - Seattle), Fahim Imam (Fahim Imam [smtifahim@gmail.com]), Maryann Martone (University of California at San Diego (UCSD))
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Neuroinformatics labs in Warsaw: free as in 'freedom'
Jarosław Rybusiński (Faculty of Physics, University of Warsaw), Anita Gardias (Faculty of Physics, University of Warsaw), Karol Augustin (Faculty of Physics, University of Warsaw), Rafał Kuś (Faculty of Physics, University of Warsaw), Mateusz Kruszyński (Faculty of Physics, University of Warsaw), Zbigniew Jędrzejewski-Szmek (Faculty of Physics, University of Warsaw), Hubert Klekowicz (Faculty of Physics, University of Warsaw), Piotr Durka (Faculty of Physics, University of Warsaw)
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Retistruct: A package to reconstruct flattened retinae
David C Sterratt (University of Edinburgh), Daniel Lyngholm (King’s College London), David Willshaw (University of Edinburgh), Ian D Thompson (King’s College London)
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Spike sorting for large dense arrays
Shabnam N. Kadir (NYU Langone Medical Center, New York/Imperial College London), Dan F.M. Goodman (Ecole Normale Superieure, Paris), John Schulman (Berkeley, California), Gyorgy Buzsaki (NYU Langone Medical Center, New York), Kenneth D. Harris (Imperial College London)
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Modeling neuroanatomical experimental design using the Ontology of Experimental Variables and Values (OoEVV)
Gully A.P.C. Burns (Information Sciences Institute / University of Southern California), Marcelo Tallis (Information Sciences Institute / University of Southern California), Jessica Turner (Mind Research Network / University of New Mexico)
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The Informatics Backbone of the Brain Genomics Superstruct Project Open Data Release
Timothy O'Keefe (Harvard University, Neuroinformatics Research Group), Victor Petrov (Harvard University, Neuroinformatics Research Group), Gabriele Fariello (Harvard University, Neuroinformatics Research Group), Avram Holmes (Harvard University, Center for Brain Science), Randy Buckner (Harvard University, Center for Brain Science)
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Datajongleur - controlling data objects and data models with Python at the neuroscientist's workbench
Philipp Lothar Rautenberg (Ludwig-Maximilans Universität München, Department of Biology, G-Node, Planegg-Martinsried), Andrey Sobolev (Ludwig-Maximilans Universität München, Department of Biology, G-Node, Planegg-Martinsried), Michael Stransky (Ludwig-Maximilians-Universität München, Institute for Computer Science, Munich), Thomas Wachtler (Ludwig-Maximilans Universität München, Department of Biology, G-Node, Planegg-Martinsried)
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XCEDE-DM: A neuroimaging extension to the W3C provenance data model
Satrajit Ghosh (Massachusetts Institute of Technology), Nolan Nichols (Integrated Brain Imaging Center, University of Washington, Seattle, WA), Syam Gadde (Brain Imaging and Analysis Center, Duke University, Durham, NC), Jason Steffener (Columbia University, New York, NY), David Keator (Department of Psychiatry and Human Behavior, Department of Computer Science; University of California, Irvine)
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Mindboggle 2 interface: online visualization of extracted brain features with XTK
Arno Klein (Columbia University), Nolan Nichols (Washington University), Daniel Haehn (Children's Hospital Boston)
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Mindboggle 2: Automated human brain MRI feature extraction, identification, shape analysis, and labeling
Arno Klein (Columbia University), Forrest Bao (Texas Tech University), Eliezer Stavsky (Columbia University), Yrjö Häme (Columbia University), Joachim Giard (Universite Catholique de Louvain), Nolan Nichols (Washington University), Satrajit Ghosh (MIT)
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NIQuery: Neuroimaging Informatics Query Framework for Data Sharing, Discovery, and Analysis
B. Nolan Nichols (Integrated Brain Imaging Center, University of Washington, Seattle, WA), Robert F. Dougherty (Center for Cognitive and Neurobiological Imaging, Stanford University, Stanford, CA), Landon T. Detwiler (Integrated Brain Imaging Center, University of Washington, Seattle, WA), Gunnar Schaefer (Center for Cognitive and Neurobiological Imaging, Stanford University, Stanford, CA), Randall J. Frank (Integrated Brain Imaging Center, University of Washington, Seattle, WA), James F. Brinkley (Integrated Brain Imaging Center, University of Washington, Seattle, WA), Brian A. Wandell (Center for Cognitive and Neurobiological Imaging, Stanford University, Stanford, CA), Thomas J. Grabowski (Integrated Brain Imaging Center, University of Washington, Seattle, WA)
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